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Open-source software and drivers

Collection of Imaris Python(3) Extensions from the Imaging and Optics Facility (IOF), Institute of Science and Technology Austria (ISTA)

Course Materials for Advanced R Course

A stage insert in well-plate format to hold and image up to 3 slides, principally applicable for any stage capable of holding a well-plate.

A robust surface tracking library that handles topology changes in large non-manifold meshes with arbitrary deformations.

Source codes for `Introgression of a block of genome under infinitesimal selection'

Introductory workshop for the use of Jupyter notebooks for image analysis pipelines by the Imaging and Optics Facility (IOF) team at ISTA.

A test application for controlling a Fluigent Aria (https://www.fluigent.com/de/forschung/instrumente/aria/) device under NIS Elements macro. A python TCP listens NIS macros to remote control the Aria system using the Fluigent's SDK (https://github.com/Fluigent/aria-sdk).

Filter cellpose segmentations and create filtered tif and csv output of the segmentation