Explore projects
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IOF-group / Facility-tools / 001606-LightPowerMeasurementZenBlue
GNU Affero General Public License v3.0This program allows a series of tests over illumination sources for Zeiss widefield and confocal microscopes running Zen Blue. It is possibe to test:
Short term stability: According to QUAREP-LiMi full test is completed in 5 minutes for each illumination line, testing powers every second. Long term stability: The QUAREP-LiMi protocol stablishes 2h tests per line, with measurement intervals of 30s. To allow this for multiple lines this program interleaves the tests for all lines every interval, allowing the full check to be completed in a single run. Linearity (response): To analyze the linearity -or response curve- of each light source the powers are measured for a series of set powers. These tests can be performed for the desired lines and for different test conditions.
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wojtan-group / Yi-Lu-Chen / FrictionFrenzy
MIT LicenseLe Groupe Wojtan's Frolic of Frenetic Friction Frenzy
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IOF-group / Image-analysis / HCR-SpeckleQuantification
GNU Affero General Public License v3.0Quantification of HCR in situ signal speckles in overall area or per individual cell. Main goal is to replicate publication results of difference marker expression between left and right sides in frogs.
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wojtan-group / Yi-Lu-Chen / GGGFFFF
MIT LicenseGlorious GLFW GUI for Frenetic Friction Frolicking
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Robert Hauschild / objective cage
Creative Commons Attribution Non Commercial 4.0 InternationalProtects your calibration objective.
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Marco Dalla Vecchia / joke-project-test
GNU Affero General Public License v3.0Updated -
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IOF-group / Teaching / 2025-ImageCompetition-Analysis
GNU Affero General Public License v3.0A fun analysis of the voting results of the IOF Image Competition 2025 that ran on the Open Campus Day 2025.
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IOF-group / Image-analysis / Snippets / ImageJ / ImageRegistration-ReferenceImage
GNU Affero General Public License v3.0Updated -
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imaging & optics facility / careless
GNU General Public License v2.0 or laterUpdated -
Christoph Sommer / frapdiff
GNU General Public License v3.0 or laterUpdated -
IOF-group / Teaching / 2024-Outreach-ToneYourFigures
GNU Affero General Public License v3.0Workshop about FAIR principles, research data management (RDM) and good practices in figure generation by the Imaging and Optics Facility (IOF) team at ISTA.
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This is intended to be used to generate training dataset from many TIFF files to be used for ilastik
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IOF-group / Image-analysis / IOF-PyImaris
GNU Affero General Public License v3.0Collection of Imaris Python(3) Extensions from the Imaging and Optics Facility (IOF), Institute of Science and Technology Austria (ISTA)
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A collection of pipelines that can be used for different bioinformatics analyses on the IST cluster.
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