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This repository contains various scripts for automation (mostly for Linux)

Integrated Python pipeline to process arbitrary-size .czi files

Quantification of HCR in situ signal speckles in overall area or per individual cell. Main goal is to replicate publication results of difference marker expression between left and right sides in frogs.

Mitotic Index from Neural Tube Organoids

Le Groupe Wojtan's Graphics of Gravelly Granular Grandeur

Le Groupe Wojtan's Marvel of Meticulous MPM Mayhem

Le Groupe Wojtan's Frolic of Frenetic Friction Frenzy

Glorious GLFW GUI for Frenetic Friction Frolicking

Training material based on Carpentries curriculum Building Better Research Software