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Linux scripts

Filter cellpose segmentations and create filtered tif and csv output of the segmentation

A test application for controlling a Fluigent Aria (https://www.fluigent.com/de/forschung/instrumente/aria/) device under NIS Elements macro. A python TCP listens NIS macros to remote control the Aria system using the Fluigent's SDK (https://github.com/Fluigent/aria-sdk).

Source codes for the manuscript "Effect of partial selfing and polygenic selection on establishment in a new habitat"

Collection of preprocessing utils for various Computer Vision datasets . Also includes code for integration with TFRecords and tf.data.Dataset pipeline. Mirror of https://github.com/ameroyer/TFDatasets

A robust surface tracking library that handles topology changes in large non-manifold meshes with arbitrary deformations.

Object Detection with Grouped Instances. See https://github.com/ameroyer/ODGI for the official clean version of the code.

A test application for controlling a Fluigent Aria (https://www.fluigent.com/de/forschung/instrumente/aria/) device under NIS Elements macro. A python TCP listens NIS macros to remote control the Aria system using the Fluigent's SDK (https://github.com/Fluigent/aria-sdk).

Collection of Matlab modules for developing image analysis applications.

A stage insert in well-plate format to hold and image up to 3 slides, principally applicable for any stage capable of holding a well-plate.