Explore projects

ktan project from Kevin Allen

A seminar on FAIR principles, scientific image processing, and proper figure preparation.

Stepper moto driver control code

A more general (arb. pixel format, fractional shift, stacks) reimplementation of https://imagej.net/ij/plugins/correct-shift.html to perform post-acquisition bi-directional scanning correction.

Collection of Matlab modules for developing image analysis applications.

Fiji script for extraction growth and shrinkage in 2D movies

Homogenized Yarn-Level Cloth - microscale simulation and fitting

Scripts for the analyze of usage data (counter4)

A brief illustration of how Marimo can be useful for image analysis pipelines and user-ready deliverable applications. Originally presented at BioOptics meeting 2024

Storage of files that can be accessed by URL

unofficial GIT tracking of the public release of DISCOVAR-denovo by Broad Institute's CRD team