Explore projects

A stage insert in well-plate format to hold and image up to 3 slides, principally applicable for any stage capable of holding a well-plate.

MALU - Monitoring and Accounting of License Usage.

A robust surface tracking library that handles topology changes in large non-manifold meshes with arbitrary deformations.

Collection of Imaris Python(3) Extensions from the Imaging and Optics Facility (IOF), Institute of Science and Technology Austria (ISTA)

Video processing pipeline for the pre-processing of fish-eye distorted videos for behavioral analysis. The videos need to be renamed, cropped, and corrected for distortion before being used in the behavioral analysis pipeline for training and prediction.

Make the measurements of PIN lateralization automated by measuring the intensity at the basal and lateral side of each cell in the endodermis of the rot tip of Arabidopsis.

Conversion and visualization of TSOAX data

Originally created by Christoph Sommer (ISTA) for AIAI meeting 10/06/2024

Introductory workshop for the use of Jupyter notebooks for image analysis pipelines by the Imaging and Optics Facility (IOF) team at ISTA.