This is intended to be used to generate training dataset from many TIFF files to be used for ilastik

An R Shiny application to apply clustering to measure differences between time course data

All the scripts for the master thesis

Collection of preprocessing utils for various Computer Vision datasets . Also includes code for integration with TFRecords and tf.data.Dataset pipeline. Mirror of https://github.com/ameroyer/TFDatasets

Source codes for the manuscript: "Replicability of introgression under linked, polygenic selection."

Generates Second Order Networks with prescribed second order motif frequencies This is the local version of Nykamp code with our patches used in the Paper Guzman et al. Science 2016

Open-source software and drivers

A python script to delete old files on Slack.

Automatic 3D Dendritic Spine Quantification with ilastik and Imaris

(ReCA) Recommendation with Context Awareness using Multi-Environment Markov Decision Processes. Mirror of https://github.com/ameroyer/ReCA

Analysis code and data for ELife publication: "Fast, high-throughput production of improved rabies viral vectors for specific, efficient and versatile transsynaptic retrograde labeling"