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IOF-group / Teaching / 2025-Talk-BatchProcessingOfSlideScannerData
GNU Affero General Public License v3.0Batch processing of slide scanner data: How we process (semi-)automatically Zeiss AxioScan Z1 data presented on the Bio-Optics meeting 2025 at Boku.
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IOF-group / Image-analysis / Snippets / ImageJ / Export-MultiseriesFiles
GNU Affero General Public License v3.0Updated -
Source codes for `Introgression of a block of genome under infinitesimal selection'
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This is intended to be used to generate training dataset from many TIFF files to be used for ilastik
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Alois SCHLOEGL / Usbip Win
GNU General Public License v3.0 or laterUpdated -
Alois SCHLOEGL / Biosig
GNU General Public License v3.0 onlyUpdated -
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Alois SCHLOEGL / malu
GNU General Public License v3.0 onlyMALU - Monitoring and Accounting of License Usage.
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IOF-group / Image-analysis / TSOAX-DataConversion-Visualization
GNU Affero General Public License v3.0Conversion and visualization of TSOAX data
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Katharina ÖLSBÖCK / wrap_2_3-public
GNU General Public License v3.0 or laterUpdated -
Christoph Sommer / convert_ometiff
GNU General Public License v3.0 or laterUpdated -
Ryan Cubero / MorphOMICs
MIT LicenseUpdated -
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Christoph Sommer / mastodon_reader
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Robert Hauschild / BiDicorrect
MIT LicenseA more general (arb. pixel format, fractional shift, stacks) reimplementation of https://imagej.net/ij/plugins/correct-shift.html to perform post-acquisition bi-directional scanning correction.
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IOF-group / Parts / Stage-top-1.5ml-Tube-holder
GNU Affero General Public License v3.0Updated